Gene detail

Detailed information of evm.model.Chr11.805 in Hemicorallium imperiale

Genomic Location: Chr11:14156581...14168870
NR annotation: CAB3982535.1, PRKCA-binding -like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr11.805 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62083	PRKCA-binding protein OS=Mus musculus OX=10090 GN=Pick1 PE=1 SV=2
Q9NRD5	PRKCA-binding protein OS=Homo sapiens OX=9606 GN=PICK1 PE=1 SV=2
Q5REH1	PRKCA-binding protein OS=Pongo abelii OX=9601 GN=PICK1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007298 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06456 all species →	Arfaptin	Arfaptin-like domain	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030798 all species →	Family	Arfaptin family	Interproscan
IPR010504 all species →	Domain	Arfaptin homology (AH) domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12141 all species →	ARFAPTIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002092 all species →	Biological Process	positive regulation of receptor internalization	Interproscan
GO:0005080 all species →	Molecular Function	protein kinase C binding	Interproscan
GO:0005543 all species →	Molecular Function	phospholipid binding	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0032588 all species →	Cellular Component	trans-Golgi network membrane	Interproscan
GO:0034315 all species →	Biological Process	regulation of Arp2/3 complex-mediated actin nucleation	Interproscan
GO:0043113 all species →	Biological Process	receptor clustering	Interproscan
GO:0019904 all species →	Molecular Function	protein domain specific binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Chr11.805.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.