Detailed information of evm.model.Chr12.268 in Hemicorallium imperiale

Genomic Location: Chr12:7795051...7816568
NR annotation: XP_028399044.1, aryl hydrocarbon receptor nuclear translocator-like isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr12.268 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P79832Aryl hydrocarbon receptor nuclear translocator OS=Oncorhynchus mykiss OX=8022 GN=arnt PE=1 SV=1
O02748Aryl hydrocarbon receptor nuclear translocator OS=Oryctolagus cuniculus OX=9986 GN=ARNT PE=2 SV=1
O15945Aryl hydrocarbon receptor nuclear translocator homolog OS=Drosophila melanogaster OX=7227 GN=tgo PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001412 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989
all species →		PASPAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001067
all species →		FamilyNuclear translocatorInterproscan
IPR000014
all species →		DomainPAS domainInterproscan
IPR035965
all species →		Homologous_superfamilyPAS domain superfamilyInterproscan
IPR013767
all species →		DomainPAS foldInterproscan
IPR050933
all species →		FamilyCircadian Clock Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23042
all species →		CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005667
all species →		Cellular Componenttranscription regulator complexInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751
all species →		Cellular Componentaryl hydrocarbon receptor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr12.268.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP