Gene detail

Detailed information of evm.model.Chr12.274 in Hemicorallium imperiale

Genomic Location: Chr12:8064430...8111329
NR annotation: XP_028400060.1, uncharacterized protein LOC114523362 [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q99PF4	Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2
P58365	Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1
Q8BNA6	Protocadherin Fat 3 OS=Mus musculus OX=10090 GN=Fat3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028	Cadherin	Cadherin domain	Domain	Interproscan
PF01390	SEA	SEA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan
IPR000082	Domain	SEA domain	Interproscan
IPR001846	Domain	von Willebrand factor, type D domain	Interproscan
IPR051216	Family	Teneurin domain-containing protein	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11219	TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0042803	Molecular Function	protein homodimerization activity	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0048666	Biological Process	neuron development	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan