Detailed information of evm.model.Chr12.413 in Hemicorallium imperiale

Genomic Location: Chr12:11313350...11334067
NR annotation: XP_028399106.1, tubulin polyglutamylase complex subunit 2-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr12.413 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6AXS8Tubulin polyglutamylase complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Tpgs2 PE=2 SV=2
Q66JT5Tubulin polyglutamylase complex subunit 2 OS=Mus musculus OX=10090 GN=Tpgs2 PE=1 SV=2
Q68CL5Tubulin polyglutamylase complex subunit 2 OS=Homo sapiens OX=9606 GN=TPGS2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09346
all species →		SMI1_KNR4SMI1 / KNR4 family (SUKH-1)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018958
all species →		DomainKnr4/Smi1-like domainInterproscan
IPR037883
all species →		Homologous_superfamilyKnr4/Smi1-like domain superfamilyInterproscan
IPR039231
all species →		FamilyTubulin polyglutamylase complex subunit 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31854
all species →		TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0018095
all species →		Biological Processprotein polyglutamylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16605TPGS2; tubulin polyglutamylase complex subunit 2-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP