Detailed information of evm.model.Chr12.512 in Hemicorallium imperiale

Genomic Location: Chr12:12669724...12694440
NR annotation: XP_046856131.1, LOW QUALITY PROTEIN: activating signal cointegrator 1-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q15650Activating signal cointegrator 1 OS=Homo sapiens OX=9606 GN=TRIP4 PE=1 SV=4
Q9QXN3Activating signal cointegrator 1 OS=Mus musculus OX=10090 GN=Trip4 PE=1 SV=2
A4UTP7Myocyte-specific enhancer factor 2C OS=Sus scrofa OX=9823 GN=MEF2C PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilySRF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan
PF04266ASCHASCH domainDomainInterproscan
PF12347HJURP_CHolliday junction regulator protein family C-terminal repeatDomainInterproscan
PF06221zf-C2HC5Putative zinc finger motif, C2HC5-typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036879Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan
IPR033896DomainMADS MEF2-likeInterproscan
IPR002100DomainTranscription factor, MADS-boxInterproscan
IPR007374DomainASCH domainInterproscan
IPR039128FamilyActivating signal cointegrator 1-likeInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR022102DomainHolliday junction regulator protein family C-terminalInterproscan
IPR009349DomainTRIP4/RQT4, C2HC5-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12963THYROID RECEPTOR INTERACTING PROTEIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:0180022Cellular ComponentRQC-trigger complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23398TRIP4; activating signal cointegrator 1-Chromosome and associated proteinsko03036deepkoala

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