Gene detail

Detailed information of evm.model.Chr12.532 in Hemicorallium imperiale

Genomic Location: Chr12:12835723...12841259
NR annotation: CAB4009030.1, retinal homeobox Rx1-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O97039	Retinal homeobox protein Rax (Fragment) OS=Dugesia japonica OX=6161 GN=RAX PE=2 SV=1
O42358	Retinal homeobox protein Rx3 OS=Danio rerio OX=7955 GN=rx3 PE=2 SV=1
Q62066	Paired mesoderm homeobox protein 2A OS=Mus musculus OX=10090 GN=Phox2a PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050649	Family	Paired Homeobox Transcription Factors	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24329	HOMEOBOX PROTEIN ARISTALESS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan