Detailed information of evm.model.Chr12.537 in Hemicorallium imperiale

Genomic Location: Chr12:12861469...12867239
NR annotation: CAB3984526.1, PREDICTED: uncharacterized protein LOC100368927 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr12.537 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60140Uncharacterized protein C18H10.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC18H10.09 PE=4 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006401 (this species only) · gene tree & orthology
Transcription factor familyzf-CCCH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642
all species →		zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF05495
all species →		zf-CHYCHY zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR008913
all species →		DomainZinc finger, CHY-typeInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR051767
all species →		FamilyNucleoporin NUP42 domain-containing proteinInterproscan
IPR037274
all species →		Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46527
all species →		NUCLEOPORIN-LIKE PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005049
all species →		Molecular Functionnuclear export signal receptor activityInterproscan
GO:0005635
all species →		Cellular Componentnuclear envelopeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr12.537.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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