Detailed information of evm.model.Chr12.641 in Hemicorallium imperiale

Genomic Location: Chr12:14191387...14207641
NR annotation: XP_028398930.1, thrombospondin type-1 domain-containing protein 4-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TSK7ADAMTS-like protein 2 OS=Mus musculus OX=10090 GN=Adamtsl2 PE=1 SV=1
Q86TH1ADAMTS-like protein 2 OS=Homo sapiens OX=9606 GN=ADAMTSL2 PE=1 SV=1
Q3UTY6Thrombospondin type-1 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Thsd4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF05986ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF08686PLACPLAC (protease and lacunin) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR010294DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR010909DomainPLACInterproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23377THSD4, ADAMTSL6; thrombospondin type-1 domain-containing protein 4-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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