Detailed information of evm.model.Chr12.725 in Hemicorallium imperiale

Genomic Location: Chr12:15399476...15412658
NR annotation: CAF3399443.1, unnamed protein product [Rotaria sp. Silwood1]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr12.725 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001642 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02221
all species →		E1_DerP2_DerF2ML domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003172
all species →		DomainMD-2-related lipid-recognition domainInterproscan
IPR036846
all species →		Homologous_superfamilyGM2-AP, lipid-recognition domain superfamilyInterproscan
IPR028996
all species →		FamilyGanglioside GM2 activatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17357
all species →		GM2 GANGLIOSIDE ACTIVATOR PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005319
all species →		Molecular Functionlipid transporter activityInterproscan
GO:0006689
all species →		Biological Processganglioside catabolic processInterproscan
GO:0006869
all species →		Biological Processlipid transportInterproscan
GO:0008047
all species →		Molecular Functionenzyme activator activityInterproscan
GO:0009898
all species →		Cellular Componentcytoplasmic side of plasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr12.725.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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