Detailed information of evm.model.Chr12.729 in Hemicorallium imperiale

Genomic Location: Chr12:15467471...15471103
NR annotation: CAB4001781.1, chondroitin sulfate synthase 1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6ZQ11Chondroitin sulfate synthase 1 OS=Mus musculus OX=10090 GN=Chsy1 PE=2 SV=2
Q86X52Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CHSY1 PE=1 SV=3
Q70JA7Chondroitin sulfate synthase 3 OS=Homo sapiens OX=9606 GN=CHSY3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05679CHGNChondroitin N-acetylgalactosaminyltransferaseFamilyInterproscan
PF01762Galactosyl_TGalactosyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008428FamilyChondroitin N-acetylgalactosaminyltransferaseInterproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR002659FamilyGlycosyl transferase, family 31Interproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12369CHONDROITIN SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0032580Cellular ComponentGolgi cisterna membraneInterproscan
GO:0030206Biological Processchondroitin sulfate biosynthetic processInterproscan
GO:0047238Molecular Functionglucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activityInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016758Molecular Functionhexosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13499CHSY; chondroitin sulfate synthaseEC:2.4.1.175
EC:2.4.1.226
Glycosyltransferasesko01003deepkoala

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