Detailed information of evm.model.Chr12.760 in Hemicorallium imperiale

Genomic Location: Chr12:16228011...16241399
NR annotation: XP_028411348.1, LOW QUALITY PROTEIN: cactin-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1Q8W0Splicing factor Cactin OS=Danio rerio OX=7955 GN=cactin PE=2 SV=1
Q8WUQ7Splicing factor Cactin OS=Homo sapiens OX=9606 GN=CACTIN PE=1 SV=3
Q9CS00Splicing factor Cactin OS=Mus musculus OX=10090 GN=Cactin PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09732CactinC_cactusCactus-binding C-terminus of cactin proteinDomainInterproscan
PF10312Cactin_midConserved mid region of cactinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019134DomainSplicing factor Cactin, C-terminalInterproscan
IPR018816DomainSplicing factor cactin, central domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21737POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0045292Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25058CACTIN; cactin-Spliceosomeko03041deepkoala

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