Detailed information of evm.model.Chr12.847 in Hemicorallium imperiale

Genomic Location: Chr12:17794159...17795867
NR annotation: CAB3992399.1, transcription factor IIIB 50 kDa subunit [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr12.847 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8KBY2Transcription factor IIIB 50 kDa subunit OS=Danio rerio OX=7955 GN=brf2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010151 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Chr12.847. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR036915
all species →		Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR000812
all species →		FamilyTranscription factor TFIIBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11618
all species →		TRANSCRIPTION INITIATION FACTOR IIB-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006352
all species →		Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0017025
all species →		Molecular FunctionTBP-class protein bindingInterproscan
GO:0070897
all species →		Biological Processtranscription preinitiation complex assemblyInterproscan
GO:0097550
all species →		Cellular Componenttranscription preinitiation complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr12.847.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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