Detailed information of evm.model.Chr12.891 in Hemicorallium imperiale

Genomic Location: Chr12:18662715...18694134
NR annotation: XP_027044748.1, DNA mismatch repair protein Msh3-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20585DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4
P13705DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3
A1CDD4DNA mismatch repair protein msh3 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=msh3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR011184FamilyDNA mismatch repair Msh2-typeInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

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