Detailed information of evm.model.Chr12.954 in Hemicorallium imperiale

Genomic Location: Chr12:20535209...20603430
NR annotation: XP_046860834.1, focadhesin-like isoform X1 [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5VW36Focadhesin OS=Homo sapiens OX=9606 GN=FOCAD PE=1 SV=2
E7FGT5Focadhesin OS=Danio rerio OX=7955 GN=focad PE=3 SV=2
A2AKG8Focadhesin OS=Mus musculus OX=10090 GN=Focad PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF11229FocadhesinFocadhesinRepeatInterproscan
PF12530DUF3730Focadhesin/RST1, DUF3730RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR045163FamilyFocadhesin/RST1Interproscan
IPR021392DomainFocadhesin, C-terminal domainInterproscan
IPR022542DomainFocadhesin/RST, DUF3730Interproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16212FOCADHESIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0060147Biological Processregulation of post-transcriptional gene silencingInterproscan

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