Gene detail

Detailed information of evm.model.Chr13.14 in Hemicorallium imperiale

Genomic Location: Chr13:36643...37245
NR annotation: CAA0091765.1, Alkyl hydroperoxide reductase C [BD1-7 clade bacterium]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr13.14 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P21762	Alkyl hydroperoxide reductase C OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=ahpC PE=1 SV=3
P56876	Alkyl hydroperoxide reductase C OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=ahpC PE=1 SV=1
P57279	Alkyl hydroperoxide reductase C OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=BU182 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001467 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00578 all species →	AhpC-TSA	AhpC/TSA family	Domain	Interproscan
PF10417 all species →	1-cysPrx_C	C-terminal domain of 1-Cys peroxiredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024706 all species →	Family	Peroxiredoxin, AhpC-type	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR000866 all species →	Domain	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Interproscan
IPR019479 all species →	Domain	Peroxiredoxin, C-terminal	Interproscan
IPR050217 all species →	Family	Thiol-specific antioxidant peroxiredoxin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10681 all species →	THIOREDOXIN PEROXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016209 all species →	Molecular Function	antioxidant activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0051920 all species →	Molecular Function	peroxiredoxin activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0008379 all species →	Molecular Function	thioredoxin peroxidase activity	Interproscan
GO:0033554 all species →	Biological Process	cellular response to stress	Interproscan
GO:0042744 all species →	Biological Process	hydrogen peroxide catabolic process	Interproscan
GO:0045454 all species →	Biological Process	cell redox homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03386	PRDX2_4, ahpC; peroxiredoxin 2/4	EC:1.11.1.24	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.