Gene detail

Detailed information of evm.model.Chr13.155 in Hemicorallium imperiale

Genomic Location: Chr13:2124595...2129386
NR annotation: CAB3993239.1, collagen alpha-1(I) chain-like [Paramuricea clavata]

Gene Structure

Sequence

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR034998	Family	Ankyrin repeat and LEM domain-containing protein 1	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46427	ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000712	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0004519	Molecular Function	endonuclease activity	Interproscan
GO:0004520	Molecular Function	DNA endonuclease activity	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan