Gene detail

Detailed information of evm.model.Chr13.176 in Hemicorallium imperiale

Genomic Location: Chr13:2545202...2579937
NR annotation: XP_029202092.2, uncharacterized protein LOC114966387 isoform X3 [Acropora millepora]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr13.176 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5IFK1	Microcephalin OS=Macaca fascicularis OX=9541 GN=MCPH1 PE=2 SV=1
P61590	Microcephalin OS=Colobus guereza OX=33548 GN=MCPH1 PE=3 SV=1
P61593	Microcephalin OS=Pan troglodytes OX=9598 GN=MCPH1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004189 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12738 all species →	PTCB-BRCT	twin BRCT domain	Family	Interproscan
PF16770 all species →	RTT107_BRCT_5	Regulator of Ty1 transposition protein 107 BRCT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001357 all species →	Domain	BRCT domain	Interproscan
IPR036420 all species →	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR022047 all species →	Family	Microcephalin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14625 all species →	MICROCEPHALIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19403	MCPH1; microcephalin	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.