Genomic Location: Chr13:254451...274888
NR annotation: CAB4003308.1, Nuclear pore complex Nup153 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr13.31 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q3ZBT5 | Syntaxin-7 OS=Bos taurus OX=9913 GN=STX7 PE=2 SV=1 |
| O15400 | Syntaxin-7 OS=Homo sapiens OX=9606 GN=STX7 PE=1 SV=4 |
| P49790 | Nuclear pore complex protein Nup153 OS=Homo sapiens OX=9606 GN=NUP153 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004961 (this species only) |
| Ubiquitin family | UBD|ZnF|NZF · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14523 all species → | Syntaxin_2 | Syntaxin-like protein | Domain | Interproscan |
| PF05739 all species → | SNARE | SNARE domain | Family | Interproscan |
| PF00641 all species → | zf-RanBP | Zn-finger in Ran binding protein and others | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036443 all species → | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| IPR001876 all species → | Domain | Zinc finger, RanBP2-type | Interproscan |
| IPR006011 all species → | Domain | Syntaxin, N-terminal domain | Interproscan |
| IPR000727 all species → | Domain | Target SNARE coiled-coil homology domain | Interproscan |
| IPR026054 all species → | Family | Nuclear pore complex protein | Interproscan |
| IPR006012 all species → | Conserved_site | Syntaxin/epimorphin, conserved site | Interproscan |
| IPR010989 all species → | Homologous_superfamily | SNARE | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23193 all species → | NUCLEAR PORE COMPLEX PROTEIN NUP | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0005643 all species → | Cellular Component | nuclear pore | Interproscan |
| GO:0006405 all species → | Biological Process | RNA export from nucleus | Interproscan |
| GO:0006606 all species → | Biological Process | protein import into nucleus | Interproscan |
| GO:0008139 all species → | Molecular Function | nuclear localization sequence binding | Interproscan |
| GO:0017056 all species → | Molecular Function | structural constituent of nuclear pore | Interproscan |
| GO:0005484 all species → | Molecular Function | SNAP receptor activity | Interproscan |
| GO:0006886 all species → | Biological Process | intracellular protein transport | Interproscan |
| GO:0016192 all species → | Biological Process | vesicle-mediated transport | Interproscan |
evm.model.Chr13.31.
