Detailed information of evm.model.Chr13.52 in Hemicorallium imperiale

Genomic Location: Chr13:435769...442215
NR annotation: XP_028406321.1, O(6)-methylguanine-induced apoptosis 2-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr13.52 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2KII4Elongin-C OS=Bos taurus OX=9913 GN=ELOC PE=1 SV=1
Q15369Elongin-C OS=Homo sapiens OX=9606 GN=ELOC PE=1 SV=1
P83940Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008238 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03931
all species →
Skp1_POZSkp1 family, tetramerisation domainDomainInterproscan
PF07004
all species →
SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011333
all species →
Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR016073
all species →
DomainSKP1 component, POZ domainInterproscan
IPR001232
all species →
FamilyS-phase kinase-associated protein 1-likeInterproscan
IPR010736
all species →
RepeatSperm-tail PG-rich repeatInterproscan
IPR039948
all species →
FamilyElongin-CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20648
all species →
ELONGIN-CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0030674
all species →
Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0070449
all species →
Cellular Componentelongin complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr13.52.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP