Detailed information of evm.model.Chr13.53 in Hemicorallium imperiale

Genomic Location: Chr13:444603...447801
NR annotation: CAB3979656.1, ribonuclease H1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr13.53 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70338Ribonuclease H1 OS=Mus musculus OX=10090 GN=Rnaseh1 PE=2 SV=1
Q5BK46Ribonuclease H1 OS=Rattus norvegicus OX=10116 GN=Rnaseh1 PE=2 SV=1
O60930Ribonuclease H1 OS=Homo sapiens OX=9606 GN=RNASEH1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004905 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00075
all species →		RNase_HRNase HDomainInterproscan
PF01693
all species →		Cauli_VICaulimovirus viroplasminFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR009027
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL9/RNase H1, N-terminalInterproscan
IPR002156
all species →		DomainRibonuclease H domainInterproscan
IPR037056
all species →		Homologous_superfamilyRibonuclease H1, N-terminal domain superfamilyInterproscan
IPR050092
all species →		FamilyRibonuclease HInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR011320
all species →		DomainRibonuclease H1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10642
all species →		RIBONUCLEASE H1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0004523
all species →		Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0043137
all species →		Biological ProcessDNA replication, removal of RNA primerInterproscan
GO:0090502
all species →		Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr13.53.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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