Genomic Location: Chr13:449212...453201
NR annotation: CAB3979655.1, syntenin-1-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr13.54 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O00560 | Syntenin-1 OS=Homo sapiens OX=9606 GN=SDCBP PE=1 SV=1 |
| O08992 | Syntenin-1 OS=Mus musculus OX=10090 GN=Sdcbp PE=1 SV=1 |
| Q9JI92 | Syntenin-1 OS=Rattus norvegicus OX=10116 GN=Sdcbp PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008487 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00595 all species → | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036034 all species → | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR001478 all species → | Domain | PDZ domain | Interproscan |
| IPR051230 all species → | Family | Amyloid-beta A4 Precursor Protein-Binding | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12345 all species → | SYNTENIN RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17254 | SDCBP; syntenin-1 | - | Exosome | ko04147 | deepkoala |
