Detailed information of evm.model.Chr13.58 in Hemicorallium imperiale

Genomic Location: Chr13:490179...493707
NR annotation: XP_028406263.1, protein phosphatase 1 regulatory subunit 42-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr13.58 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R1Z4Protein phosphatase 1 regulatory subunit 42 OS=Mus musculus OX=10090 GN=Ppp1r42 PE=1 SV=1
Q4R803Protein phosphatase 1 regulatory subunit 42 OS=Macaca fascicularis OX=9541 GN=PPP1R42 PE=2 SV=1
Q7Z4L9Protein phosphatase 1 regulatory subunit 42 OS=Homo sapiens OX=9606 GN=PPP1R42 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007634 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799
all species →
LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025875
all species →
RepeatLeucine rich repeat 4Interproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050836
all species →
FamilySDS22/Internalin LRR-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46652
all species →
LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17579PPP1R42, LRRC67; protein phosphatase 1 regulatory subunit 42-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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