Genomic Location: Chr14:2049726...2106815
NR annotation: XP_028392398.1, splicing factor 3B subunit 3-like isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr14.126 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A0JN52 | Splicing factor 3B subunit 3 OS=Bos taurus OX=9913 GN=SF3B3 PE=2 SV=1 |
| Q15393 | Splicing factor 3B subunit 3 OS=Homo sapiens OX=9606 GN=SF3B3 PE=1 SV=4 |
| Q1LVE8 | Splicing factor 3B subunit 3 OS=Danio rerio OX=7955 GN=sf3b3 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004170 (this species only) |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DDB1 · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10433 all species → | MMS1_N | Mono-functional DNA-alkylating methyl methanesulfonate N-term | Repeat | Interproscan |
| PF03178 all species → | CPSF_A | CPSF A subunit region | Repeat | Interproscan |
| PF00035 all species → | dsrm | Double-stranded RNA binding motif | Domain | Interproscan |
| PF00209 all species → | SNF | Sodium:neurotransmitter symporter family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR018846 all species → | Domain | Cleavage/polyadenylation specificity factor, A subunit, N-terminal | Interproscan |
| IPR044463 all species → | Domain | DUS2, double-stranded RNA binding domain | Interproscan |
| IPR004871 all species → | Domain | Cleavage/polyadenylation specificity factor, A subunit, C-terminal | Interproscan |
| IPR000175 all species → | Family | Sodium:neurotransmitter symporter | Interproscan |
| IPR037272 all species → | Homologous_superfamily | Sodium:neurotransmitter symporter superfamily | Interproscan |
| IPR050358 all species → | Family | RSE1/DDB1/CFT1/CPSF1 | Interproscan |
| IPR014720 all species → | Domain | Double-stranded RNA-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10644 all species → | DNA REPAIR/RNA PROCESSING CPSF FAMILY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000049 all species → | Molecular Function | tRNA binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0000398 all species → | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005686 all species → | Cellular Component | U2 snRNP | Interproscan |
| GO:0030620 all species → | Molecular Function | U2 snRNA binding | Interproscan |
evm.model.Chr14.126.
