Detailed information of evm.model.Chr14.168 in Hemicorallium imperiale

Genomic Location: Chr14:2561107...2620243
NR annotation: XP_028409901.1, protein fantom-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.168 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P21448ATP-dependent translocase ABCB1 OS=Cricetulus griseus OX=10029 GN=ABCB1 PE=1 SV=2
P08183ATP-dependent translocase ABCB1 OS=Homo sapiens OX=9606 GN=ABCB1 PE=1 SV=3
P21447ATP-dependent translocase ABCB1 OS=Mus musculus OX=10090 GN=Abcb1a PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003640 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18111
all species →
RPGR1_CRetinitis pigmentosa G-protein regulator interacting C-terminalDomainInterproscan
PF00168
all species →
C2C2 domainDomainInterproscan
PF00005
all species →
ABC_tranABC transporterDomainInterproscan
PF00664
all species →
ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF11618
all species →
C2-C2_1First C2 domain of RPGR-interacting protein 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041091
all species →
DomainRPGRIP1, C-terminalInterproscan
IPR000008
all species →
DomainC2 domainInterproscan
IPR036640
all species →
Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR003439
all species →
DomainABC transporter-like, ATP-binding domainInterproscan
IPR035892
all species →
Homologous_superfamilyC2 domain superfamilyInterproscan
IPR011527
all species →
DomainABC transporter type 1, transmembrane domainInterproscan
IPR021656
all species →
DomainRPGR-interacting protein 1, first C2 domainInterproscan
IPR017871
all species →
Conserved_siteABC transporter-like, conserved siteInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR039421
all species →
FamilyType 1 protein exporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24222
all species →
ABC TRANSPORTER B FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0055085
all species →
Biological Processtransmembrane transportInterproscan
GO:0140359
all species →
Molecular FunctionABC-type transporter activityInterproscan
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0042626
all species →
Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr14.168.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP