Gene detail

Detailed information of evm.model.Chr14.185 in Hemicorallium imperiale

Genomic Location: Chr14:2777332...2779814
NR annotation: CAB4004205.1, cytochrome b-c1 complex subunit Rieske, mitochondrial-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr14.185 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q69BJ6	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Symphalangus syndactylus OX=9590 GN=UQCRFS1 PE=3 SV=1
Q69BJ8	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Lagothrix lagotricha OX=9519 GN=UQCRFS1 PE=3 SV=1
Q5ZLR5	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus gallus OX=9031 GN=UQCRFS1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008585 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00355 all species →	Rieske	Rieske [2Fe-2S] domain	Domain	Interproscan
PF02921 all species →	UCR_TM	Ubiquinol cytochrome reductase transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036922 all species →	Homologous_superfamily	Rieske [2Fe-2S] iron-sulphur domain superfamily	Interproscan
IPR014349 all species →	Family	Rieske iron-sulphur protein	Interproscan
IPR017941 all species →	Domain	Rieske [2Fe-2S] iron-sulphur domain	Interproscan
IPR005805 all species →	Domain	Rieske iron-sulphur protein, C-terminal	Interproscan
IPR006317 all species →	Domain	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	Interproscan
IPR037008 all species →	Homologous_superfamily	Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamily	Interproscan
IPR004192 all species →	Domain	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10134 all species →	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0005750 all species →	Cellular Component	obsolete mitochondrial respiratory chain complex III	Interproscan
GO:0006122 all species →	Biological Process	mitochondrial electron transport, ubiquinol to cytochrome c	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0008121 all species →	Molecular Function	ubiquinol-cytochrome-c reductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00411	UQCRFS1, RIP1, petA; ubiquinol-cytochrome c reductase iron-sulfur subunit	EC:7.1.1.8	Non-alcoholic fatty liver disease	ko04932	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.