Detailed information of evm.model.Chr14.264 in Hemicorallium imperiale

Genomic Location: Chr14:3905055...3909682
NR annotation: XP_028392153.1, charged multivesicular body protein 4c-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.264 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IQ73Charged multivesicular body protein 4c OS=Danio rerio OX=7955 GN=chmp4c PE=2 SV=1
Q9D8B3Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2
Q7ZVC4Charged multivesicular body protein 4b OS=Danio rerio OX=7955 GN=chmp4b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003038 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03357
all species →		Snf7Snf7FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005024
all species →		FamilySnf7 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22761
all species →		CHARGED MULTIVESICULAR BODY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007034
all species →		Biological Processvacuolar transportInterproscan
GO:0000815
all species →		Cellular ComponentESCRT III complexInterproscan
GO:0005771
all species →		Cellular Componentmultivesicular bodyInterproscan
GO:0006900
all species →		Biological Processvesicle budding from membraneInterproscan
GO:0009898
all species →		Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0032511
all species →		Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12194CHMP4A_B, SNF7, VPS32A_B; charged multivesicular body protein 4A/B-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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