Detailed information of evm.model.Chr14.316 in Hemicorallium imperiale

Genomic Location: Chr14:4484535...4491048
NR annotation: XP_028392557.1, interferon regulatory factor 8-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.316 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q02556Interferon regulatory factor 8 OS=Homo sapiens OX=9606 GN=IRF8 PE=1 SV=2
P23611Interferon regulatory factor 8 OS=Mus musculus OX=10090 GN=Irf8 PE=1 SV=1
Q90871Interferon regulatory factor 8 OS=Gallus gallus OX=9031 GN=IRF8 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000568 (this species only) · gene tree & orthology
Transcription factor familyIRF · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00605
all species →
IRFInterferon regulatory factor transcription factorDomainInterproscan
PF10401
all species →
IRF-3Interferon-regulatory factor 3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001346
all species →
DomainInterferon regulatory factor, DNA-binding domainInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR019471
all species →
DomainInterferon regulatory factor-3Interproscan
IPR008984
all species →
Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR019817
all species →
Conserved_siteInterferon regulatory factor, conserved siteInterproscan
IPR017855
all species →
Homologous_superfamilySMAD-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11949
all species →
INTERFERON REGULATORY FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000976
all species →
Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0002376
all species →
Biological Processimmune system processInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr14.316.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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