Detailed information of evm.model.Chr14.399 in Hemicorallium imperiale

Genomic Location: Chr14:5337558...5345438
NR annotation: CAB3997591.1, tRNA-specific adenosine deaminase 1 isoform X1 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.399 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZI16tRNA-specific adenosine deaminase 1 OS=Gallus gallus OX=9031 GN=ADAT1 PE=2 SV=1
Q9BUB4tRNA-specific adenosine deaminase 1 OS=Homo sapiens OX=9606 GN=ADAT1 PE=1 SV=1
Q4R7N3tRNA-specific adenosine deaminase 1 OS=Macaca fascicularis OX=9541 GN=ADAT1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005152 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02137
all species →		A_deaminAdenosine-deaminase (editase) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002466
all species →		DomainAdenosine deaminase/editaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46516
all species →		TRNA-SPECIFIC ADENOSINE DEAMINASE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0004000
all species →		Molecular Functionadenosine deaminase activityInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0008251
all species →		Molecular FunctiontRNA-specific adenosine deaminase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15440TAD1, ADAT1; tRNA-specific adenosine deaminase 1EC:3.5.4.34
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP