Gene detail

Detailed information of evm.model.Chr14.413 in Hemicorallium imperiale

Genomic Location: Chr14:5451883...5454164
NR annotation: CAB4037860.1, glycine cleavage system H, mitochondrial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr14.413 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91WK5	Glycine cleavage system H protein, mitochondrial OS=Mus musculus OX=10090 GN=Gcsh PE=1 SV=2
Q5I0P2	Glycine cleavage system H protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gcsh PE=2 SV=1
Q9N121	Glycine cleavage system H protein, mitochondrial OS=Oryctolagus cuniculus OX=9986 GN=GCSH PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004709 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01597 all species →	GCV_H	Glycine cleavage H-protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033753 all species →	Family	Glycine cleavage system H-protein/Simiate	Interproscan
IPR017453 all species →	Family	Glycine cleavage system H-protein, subgroup	Interproscan
IPR003016 all species →	Binding_site	2-oxo acid dehydrogenase, lipoyl-binding site	Interproscan
IPR002930 all species →	Family	Glycine cleavage system H-protein	Interproscan
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11715 all species →	GLYCINE CLEAVAGE SYSTEM H PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005960 all species →	Cellular Component	glycine cleavage complex	Interproscan
GO:0019464 all species →	Biological Process	glycine decarboxylation via glycine cleavage system	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0009249 all species →	Biological Process	protein lipoylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02437	gcvH, GCSH; glycine cleavage system H protein	-	Lipoic acid metabolism	ko00785	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.