Detailed information of evm.model.Chr14.429 in Hemicorallium imperiale

Genomic Location: Chr14:5585780...5602493
NR annotation: XP_028392864.1, enhancer of mRNA-decapping protein 4-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.429 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LUT1Enhancer of mRNA-decapping protein 4 OS=Danio rerio OX=7955 GN=edc4 PE=3 SV=1
Q3UJB9Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=2
Q6P2E9Enhancer of mRNA-decapping protein 4 OS=Homo sapiens OX=9606 GN=EDC4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003906 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21289
all species →		EDC4_CEnhancer of mRNA-decapping protein 4, C-terminalDomainInterproscan
PF16529
all species →		Ge1_WD40WD40 region of Ge1, enhancer of mRNA-decapping proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045152
all species →		FamilyEnhancer of mRNA-decapping protein 4-likeInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR049404
all species →		DomainEnhancer of mRNA-decapping protein 4, C-terminalInterproscan
IPR032401
all species →		DomainEnhancer of mRNA-decapping protein 4, WD40 repeat regionInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR044938
all species →		Homologous_superfamilyEnhancer of mRNA-decapping protein 4, conserved C-terminal domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15598
all species →		ENHANCER OF MRNA-DECAPPING PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0031087
all species →		Biological Processdeadenylation-independent decapping of nuclear-transcribed mRNAInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12616EDC4; enhancer of mRNA-decapping protein 4-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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