Detailed information of evm.model.Chr14.445 in Hemicorallium imperiale

Genomic Location: Chr14:5688753...5695180
NR annotation: CAB3998177.1, Hypothetical predicted protein [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.445 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O08654Phagosome assembly factor 1 OS=Rattus norvegicus OX=10116 GN=Phaf1 PE=2 SV=1
Q922R1Phagosome assembly factor 1 OS=Mus musculus OX=10090 GN=Phaf1 PE=1 SV=2
Q9BSU1Phagosome assembly factor 1 OS=Homo sapiens OX=9606 GN=PHAF1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009592 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03676
all species →		PHAF1Phagosome assembly factor 1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039156
all species →		FamilyPHAF1/Protein broad-mindedInterproscan
IPR005373
all species →		FamilyPhagosome assembly factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13465
all species →		UPF0183 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005802
all species →		Cellular Componenttrans-Golgi networkInterproscan
GO:0043001
all species →		Biological ProcessGolgi to plasma membrane protein transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K27411PHAF1; phagosome assembly factor 1-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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