Detailed information of evm.model.Chr14.480 in Hemicorallium imperiale

Genomic Location: Chr14:6018056...6030555
NR annotation: CAB4008106.1, Apoptotic chromatin condensation inducer in the nucleus [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.480 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66JZ4T-cell activation inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=TCAIM PE=1 SV=1
Q8N3R3T-cell activation inhibitor, mitochondrial OS=Homo sapiens OX=9606 GN=TCAIM PE=1 SV=2
P0DKR2T-cell activation inhibitor, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tcaim PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008700 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan
PF14687
all species →		DUF4460Domain of unknown function (DUF4460)FamilyInterproscan
PF02037
all species →		SAPSAP domainDomainInterproscan
PF14688
all species →		DUF4461Domain of unknown function (DUF4461)FamilyInterproscan
PF16294
all species →		RSB_motifRNSP1-SAP18 binding (RSB) motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034257
all species →		DomainAcinus, RNA recognition motifInterproscan
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR028031
all species →		DomainDomain of unknown function DUF4460Interproscan
IPR003034
all species →		DomainSAP domainInterproscan
IPR027989
all species →		DomainDomain of unknown function DUF4461Interproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR052793
all species →		FamilyExon junction complex-associated proteinInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR032552
all species →		Conserved_siteAcin1, RNSP1-SAP18 binding (RSB) motifInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46589
all species →		APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008380
all species →		Biological ProcessRNA splicingInterproscan
GO:0061574
all species →		Cellular ComponentASAP complexInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr14.480.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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