Detailed information of evm.model.Chr14.679 in Hemicorallium imperiale

Genomic Location: Chr14:8892875...8908821
NR annotation: CAB4014161.1, Ran-binding 9 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr14.679 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P69566Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1
A1L252Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1
Q96S59Ran-binding protein 9 OS=Homo sapiens OX=9606 GN=RANBP9 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006439 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08513
all species →		LisHLisHDomainInterproscan
PF10607
all species →		CTLHCTLH/CRA C-terminal to LisH motif domainDomainInterproscan
PF00622
all species →		SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035782
all species →		DomainRan binding protein 9/10, SPRY domainInterproscan
IPR043136
all species →		Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR013144
all species →		DomainCRA domainInterproscan
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR006595
all species →		DomainCTLH, C-terminal LisH motifInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050618
all species →		FamilyUbiquitination and Signaling Pathway RegulatorInterproscan
IPR024964
all species →		DomainCTLH/CRA C-terminal to LisH motif domainInterproscan
IPR003877
all species →		DomainSPRY domainInterproscan
IPR001870
all species →		DomainB30.2/SPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12864
all species →		RAN BINDING PROTEIN 9-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23334RANBP9_10, RANBPM; Ran-binding protein 9/10-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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