Gene detail

Detailed information of evm.model.Chr14.88 in Hemicorallium imperiale

Genomic Location: Chr14:1571813...1604571
NR annotation: CAB3982238.1, AFG3 2 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9Y4W6	Mitochondrial inner membrane m-AAA protease component AFG3L2 OS=Homo sapiens OX=9606 GN=AFG3L2 PE=1 SV=2
Q2KJI7	Mitochondrial inner membrane m-AAA protease component AFG3L2 OS=Bos taurus OX=9913 GN=AFG3L2 PE=2 SV=1
Q8JZQ2	Mitochondrial inner membrane m-AAA protease component AFG3L2 OS=Mus musculus OX=10090 GN=Afg3l2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF01434	Peptidase_M41	Peptidase family M41	Domain	Interproscan
PF06480	FtsH_ext	FtsH Extracellular	Family	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052311	Family	MMS22L-TONSL complex component	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR000642	Domain	Peptidase M41	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011546	Domain	Peptidase M41, FtsH extracellular	Interproscan
IPR005936	Family	ATP-dependent zinc metalloprotease, FtsH	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR037219	Homologous_superfamily	Peptidase M41-like	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46358	TONSOKU-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0031297	Biological Process	replication fork processing	Interproscan
GO:0043596	Cellular Component	nuclear replication fork	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan