Detailed information of evm.model.Chr15.235 in Hemicorallium imperiale

Genomic Location: Chr15:6119219...6128062
NR annotation: XP_028407713.1, tetratricopeptide repeat protein 16-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr15.235 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C1F5Tetratricopeptide repeat protein 16 OS=Mus musculus OX=10090 GN=Ttc16 PE=2 SV=1
Q95LZ5Tetratricopeptide repeat protein 16 OS=Macaca fascicularis OX=9541 GN=TTC16 PE=2 SV=1
Q8NEE8Tetratricopeptide repeat protein 16 OS=Homo sapiens OX=9606 GN=TTC16 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007692 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13414
all species →		TPR_11TPR repeatRepeatInterproscan
PF13432
all species →		TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45153
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 16Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr15.235.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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