Detailed information of evm.model.Chr15.392 in Hemicorallium imperiale

Genomic Location: Chr15:8648692...8705110
NR annotation: XP_028407581.1, neurogenic locus notch homolog protein 1-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JM13Rab5 GDP/GTP exchange factor OS=Mus musculus OX=10090 GN=Rabgef1 PE=1 SV=1
O18973Rab5 GDP/GTP exchange factor OS=Bos taurus OX=9913 GN=RABGEF1 PE=1 SV=1
Q9UJ41Rab5 GDP/GTP exchange factor OS=Homo sapiens OX=9606 GN=RABGEF1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF18151DUF5601Domain of unknown function (DUF5601)DomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00066NotchLNR domainDomainInterproscan
PF02204VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF06816NODNOTCH proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011656DomainNotch, NODP domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR041545DomainRABX5, catalytic core helical domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000800DomainNotch domainInterproscan
IPR003123DomainVPS9 domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan
IPR010660DomainNotch, NOD domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02599NOTCH1; Notch 1-Endocrine resistanceko01522deepkoala

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