Detailed information of evm.model.Chr15.427 in Hemicorallium imperiale

Genomic Location: Chr15:9036046...9047907
NR annotation: XP_028394941.1, probable E3 ubiquitin-protein ligase makorin-1 isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9TT91E3 ubiquitin-protein ligase makorin-1 OS=Notamacropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1
Q13434Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1
Q9UHC7E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3
Gene familySubfamily
Transcription Factors Familyzf-CCCH
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00887ACBPAcyl CoA binding proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR035984Homologous_superfamilyAcyl-CoA binding protein superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR000582DomainAcyl-CoA-binding protein, ACBPInterproscan
IPR045072FamilyMKRN-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11224MAKORIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000062Molecular Functionfatty-acyl-CoA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

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