Gene detail

Detailed information of evm.model.Chr15.439 in Hemicorallium imperiale

Genomic Location: Chr15:9166021...9173613
NR annotation: CAB3990075.1, barH-like 1 homeobox [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9PU20	Ventral anterior homeobox 2a OS=Xenopus laevis OX=8355 GN=vax2-a PE=2 SV=1
Q9IAX9	Ventral anterior homeobox 2b OS=Xenopus laevis OX=8355 GN=vax2-b PE=2 SV=1
F1R2J1	Homeobox protein pnx OS=Danio rerio OX=7955 GN=pnx PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR050877	Family	EMX/VAX/Noto Homeobox Transcription Factors	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24339	HOMEOBOX PROTEIN EMX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan