Detailed information of evm.model.Chr15.615 in Hemicorallium imperiale

Genomic Location: Chr15:11097599...11103633
NR annotation: CAB4013938.1, 28S ribosomal S18b, mitochondrial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr15.615 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5X4X1Small ribosomal subunit protein bS18 OS=Legionella pneumophila (strain Paris) OX=297246 GN=rpsR PE=3 SV=1
A5IC89Small ribosomal subunit protein bS18 OS=Legionella pneumophila (strain Corby) OX=400673 GN=rpsR PE=3 SV=1
Q5ZV49Small ribosomal subunit protein bS18 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) OX=272624 GN=rpsR PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008510 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01084
all species →		Ribosomal_S18Ribosomal protein S18FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036870
all species →		Homologous_superfamilySmall ribosomal subunit protein bS18 superfamilyInterproscan
IPR001648
all species →		FamilySmall ribosomal subunit protein bS18Interproscan
IPR040054
all species →		FamilySmall ribosomal subunit protein mS40Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13329
all species →		MITOCHONDRIAL RIBOSOMAL PROTEIN S18BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr15.615.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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