Detailed information of evm.model.Chr15.634 in Hemicorallium imperiale

Genomic Location: Chr15:11390370...11396755
NR annotation: XP_028411000.1, pre-B-cell leukemia transcription factor 1-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B4F6V6Pre-B-cell leukemia transcription factor 1 OS=Xenopus tropicalis OX=8364 GN=pbx1 PE=2 SV=1
Q7PMT1Homeobox protein extradenticle OS=Anopheles gambiae OX=7165 GN=exd PE=3 SV=2
Q8QGC4Pre-B-cell leukemia transcription factor 1 OS=Xenopus laevis OX=8355 GN=pbx1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03792PBCPBC domainFamilyInterproscan
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR005542DomainPBX, PBC domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR008422DomainHomeobox KN domainInterproscan
IPR050224FamilyThree Amino acid Loop Extension (TALE) homeoboxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0048568Biological Processembryonic organ developmentInterproscan
GO:0048666Biological Processneuron developmentInterproscan

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