Detailed information of evm.model.Chr15.703 in Hemicorallium imperiale

Genomic Location: Chr15:12463895...12594991
NR annotation: XP_028394577.1, vacuolar protein sorting-associated protein 13B-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr15.703 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z7G8Intermembrane lipid transfer protein VPS13B OS=Homo sapiens OX=9606 GN=VPS13B PE=1 SV=2
Q80TY5Intermembrane lipid transfer protein VPS13B OS=Mus musculus OX=10090 GN=Vps13b PE=1 SV=3
Q00685Complement C3 (Fragment) OS=Lethenteron camtschaticum OX=980415 GN=C3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17790
all species →		MG1Macroglobulin domain MG1DomainInterproscan
PF17791
all species →		MG3Macroglobulin domain MG3DomainInterproscan
PF07703
all species →		A2M_BRDAlpha-2-macroglobulin bait region domainDomainInterproscan
PF17789
all species →		MG4Macroglobulin domain MG4DomainInterproscan
PF00207
all species →		A2MAlpha-2-macroglobulin familyFamilyInterproscan
PF07678
all species →		TED_complementA-macroglobulin TED domainRepeatInterproscan
PF16909
all species →		VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR041425
all species →		DomainComplement C3/4/5, macroglobulin domain MG1Interproscan
IPR041555
all species →		DomainMacroglobulin domain MG3Interproscan
IPR001599
all species →		DomainAlpha-2-macroglobulinInterproscan
IPR019742
all species →		Conserved_siteAlpha-2-macroglobulin, conserved siteInterproscan
IPR011625
all species →		DomainAlpha-2-macroglobulin, bait region domainInterproscan
IPR040839
all species →		DomainMacroglobulin domain MG4Interproscan
IPR039782
all species →		FamilyIntermembrane lipid transfer protein VPS13BInterproscan
IPR047565
all species →		Conserved_siteAlpha-macroglobulin-like, thiol-ester bond-forming regionInterproscan
IPR011626
all species →		DomainAlpha-macroglobulin-like, TED domainInterproscan
IPR031645
all species →		DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR008930
all species →		Homologous_superfamilyTerpenoid cyclases/protein prenyltransferase alpha-alpha toroidInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12517
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004866
all species →		Molecular Functionendopeptidase inhibitor activityInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr15.703.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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