Detailed information of evm.model.Chr15.741 in Hemicorallium imperiale

Genomic Location: Chr15:13686852...13706107
NR annotation: XP_028410980.1, elongator complex protein 2-like isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr15.741 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5EBD9Elongator complex protein 2 OS=Xenopus tropicalis OX=8364 GN=elp2 PE=2 SV=1
Q05AM5Elongator complex protein 2 OS=Danio rerio OX=7955 GN=elp2 PE=2 SV=1
Q496Z0Elongator complex protein 2 OS=Rattus norvegicus OX=10116 GN=Elp2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003111 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037289
all species →		FamilyElongator complex protein 2Interproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44111
all species →		ELONGATOR COMPLEX PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588
all species →		Cellular Componentelongator holoenzyme complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr15.741.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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