Detailed information of evm.model.Chr15.741 in Hemicorallium imperiale

Genomic Location: Chr15:13686852...13706107
NR annotation: XP_028410980.1, elongator complex protein 2-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5EBD9Elongator complex protein 2 OS=Xenopus tropicalis OX=8364 GN=elp2 PE=2 SV=1
Q05AM5Elongator complex protein 2 OS=Danio rerio OX=7955 GN=elp2 PE=2 SV=1
Q496Z0Elongator complex protein 2 OS=Rattus norvegicus OX=10116 GN=Elp2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037289FamilyElongator complex protein 2Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44111ELONGATOR COMPLEX PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP