Gene detail

Detailed information of evm.model.Chr15.98 in Hemicorallium imperiale

Genomic Location: Chr15:2525000...2559573
NR annotation: XP_028395073.1, myomegalin-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr15.98 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K389	CDK5 regulatory subunit-associated protein 2 OS=Mus musculus OX=10090 GN=Cdk5rap2 PE=1 SV=3
Q9BE52	CDK5 regulatory subunit-associated protein 2 OS=Macaca fascicularis OX=9541 GN=CDK5RAP2 PE=2 SV=1
Q96SN8	CDK5 regulatory subunit-associated protein 2 OS=Homo sapiens OX=9606 GN=CDK5RAP2 PE=1 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001978 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07989 all species →	Cnn_1N	Centrosomin N-terminal motif 1	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012943 all species →	Domain	Centrosomin, N-terminal motif 1	Interproscan
IPR042791 all species →	Family	CDK5 regulatory subunit-associated protein 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46930 all species →	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005815 all species →	Cellular Component	microtubule organizing center	Interproscan
GO:0000132 all species →	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0000242 all species →	Cellular Component	pericentriolar material	Interproscan
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0001578 all species →	Biological Process	microtubule bundle formation	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan
GO:0007099 all species →	Biological Process	centriole replication	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0031116 all species →	Biological Process	positive regulation of microtubule polymerization	Interproscan
GO:0035371 all species →	Cellular Component	microtubule plus-end	Interproscan
GO:0043015 all species →	Molecular Function	gamma-tubulin binding	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0046600 all species →	Biological Process	negative regulation of centriole replication	Interproscan
GO:0048471 all species →	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0090266 all species →	Biological Process	regulation of mitotic cell cycle spindle assembly checkpoint	Interproscan
GO:0097431 all species →	Cellular Component	mitotic spindle pole	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Chr15.98.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.