Detailed information of evm.model.Chr16.221 in Hemicorallium imperiale

Genomic Location: Chr16:3626440...3635531
NR annotation: CAB4012531.1, synaptonemal complex 1-like, partial [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.221 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005881 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05483
all species →		SCP-1Synaptonemal complex protein 1 (SCP-1)Coiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008827
all species →		FamilySynaptonemal complex protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46918
all species →		SYNAPTONEMAL COMPLEX PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000795
all species →		Cellular Componentsynaptonemal complexInterproscan
GO:0007130
all species →		Biological Processsynaptonemal complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr16.221.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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