Detailed information of evm.model.Chr16.244 in Hemicorallium imperiale

Genomic Location: Chr16:3880387...3884447
NR annotation: CAB4007456.1, Methylosome 50 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.244 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RBZ2Methylosome protein WDR77 OS=Pongo abelii OX=9601 GN=WDR77 PE=2 SV=1
Q9BQA1Methylosome protein WDR77 OS=Homo sapiens OX=9606 GN=WDR77 PE=1 SV=1
Q5E9I7Methylosome protein WDR77 OS=Bos taurus OX=9913 GN=WDR77 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006953 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020472
all species →		RepeatG-protein beta WD-40 repeatInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR052139
all species →		FamilyMethylosome Component WDR77Interproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46853
all species →		METHYLOSOME PROTEIN 50Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0034709
all species →		Cellular ComponentmethylosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13221WDR77, MEP50; methylosome protein 50-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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