Detailed information of evm.model.Chr16.333 in Hemicorallium imperiale

Genomic Location: Chr16:5359072...5373780
NR annotation: CAB4003007.1, calcium-responsive transcription factor-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.333 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D4A7U2Calcium-responsive transcription factor OS=Rattus norvegicus OX=10116 GN=Carf PE=1 SV=1
Q8VHI4Calcium-responsive transcription factor OS=Mus musculus OX=10090 GN=Carf PE=2 SV=1
Q8N187Calcium-responsive transcription factor OS=Homo sapiens OX=9606 GN=CARF PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006847 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15299
all species →		ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029309
all species →		FamilyCalcium-responsive transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14694
all species →		CALCIUM-RESPONSIVE TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr16.333.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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