Gene detail

Detailed information of evm.model.Chr16.383 in Hemicorallium imperiale

Genomic Location: Chr16:7025212...7026574
NR annotation: XP_046845656.1, transcription factor Sox-19b-like [Xenia sp. Carnegie-2017]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P43680	Transcription factor SOX-18 OS=Mus musculus OX=10090 GN=Sox18 PE=1 SV=3
Q3KQ35	Transcription factor Sox-17-alpha-A OS=Xenopus laevis OX=8355 GN=sox17a-a PE=1 SV=1
Q90ZH8	Transcription factor Sox-18A OS=Xenopus laevis OX=8355 GN=sox18-a PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09270	SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)	-	Transcription factors	ko03000	deepkoala