Detailed information of evm.model.Chr16.392 in Hemicorallium imperiale

Genomic Location: Chr16:7235930...7281069
NR annotation: CAB3983883.1, tubulin--tyrosine ligase 12 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.392 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3UDE2Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1
Q14166Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens OX=9606 GN=TTLL12 PE=1 SV=2
A8XXC0Tubulin--tyrosine ligase-like protein 12 OS=Caenorhabditis briggsae OX=6238 GN=ttll-12 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004204 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03133
all species →		TTLTubulin-tyrosine ligase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004344
all species →		FamilyTubulin-tyrosine ligase/Tubulin polyglutamylaseInterproscan
IPR027749
all species →		FamilyTubulin--tyrosine ligase-like protein 12Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46088
all species →		TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0036211
all species →		Biological Processprotein modification processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16609TTLL12; tubulin--tyrosine ligase-like protein 12-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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