Detailed information of evm.model.Chr16.4 in Hemicorallium imperiale

Genomic Location: Chr16:195581...223014
NR annotation: XP_028393896.1, sentrin-specific protease 1-like isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.4 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P59110Sentrin-specific protease 1 OS=Mus musculus OX=10090 GN=Senp1 PE=1 SV=1
Q9P0U3Sentrin-specific protease 1 OS=Homo sapiens OX=9606 GN=SENP1 PE=1 SV=2
Q5RBB1Sentrin-specific protease 1 OS=Pongo abelii OX=9601 GN=SENP1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001960 (this species only)
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02902
all species →		Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF15299
all species →		ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR029309
all species →		FamilyCalcium-responsive transcription factorInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12606
all species →		SENTRIN/SUMO-SPECIFIC PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016926
all species →		Biological Processprotein desumoylationInterproscan
GO:0016929
all species →		Molecular FunctiondeSUMOylase activityInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03345SENP2, AXAM2; sentrin-specific protease 2 (axin associating molecule)EC:3.4.22.68
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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